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Domestic Exclusive | Ru(bpy)2dppz(PF6)2: A Classic “Light-Switch” Luminescent Probe for DNA

2026/3/19 11:27:48 Browse volume(7)
Luminescent Probe

Ru(bpy)2dppz(PF6)2 (CAS: 87564-74-7)


In the context of rapid developments in nucleic acid structure research, molecular recognition, and bioimaging technologies, luminescent probes capable of generating responsive signals to DNA structural changes are attracting increasing attention from researchers. Among these, ruthenium(II) polypyridyl complexes, represented by Ru(bpy)₂dppz²⁺, are widely used for DNA binding studies, nucleic acid detection system development, and structural change analysis due to their unique DNA "light-switch" luminescence effect.

However, the synthesis of such metal-coordinated luminescent probes is quite challenging. Their molecular structure involves multiple complex steps, including polypyridyl ligand construction, fine synthesis of the dppz ligand, and coordination assembly around the ruthenium center, all requiring stringent control over reaction conditions, ligand purity, and coordination ratios. Even slight deviations can lead to the formation of side complexes or reduced product purity, thereby affecting their photophysical properties and experimental stability. Consequently, for a long time, such reagents have mainly relied on imported supply.

Leveraging its accumulated expertise in functional ligand synthesis and metal coordination chemistry, GeneSeqTools Bioscience & Technology has successfully achieved the stable synthesis and scaled-up preparation of Ru(bpy)2dppz(PF6)2, providing a reliable domestic alternative for domestic research institutions. This product features high light-switch contrast, stable DNA binding, and consistent batch-to-batch optical performance, and is available in various specifications from stock to meet application needs in nucleic acid structure research, bioimaging, and molecular probe development.

1. Product Overview

Ru(bpy)2dppz(PF6)2 87564-74-7 Structural Formula

Chinese Name: Bis(2,2'-bipyridine-ΚN1,ΚN1')(dipyrido[3,2-a:2',3'-c]phenazine-ΚN4,ΚN5)ruthenium(2+)

English Name: Bis(2,2'-bipyridine-N1,N1')(dipyrido[3,2-a:2',3'-c]phenazine-N4,N5)-Ruthenium(2+), bis(hexafluorophosphate) complex

Abbreviation: Ru(bpy)2dppz(PF6)2

CAS Number: 87564-74-7

Molecular Formula: C38H26P2F12N8Ru

Molecular Weight: 985.10

Specifications: 10 mg / 100 mg / 1 g (Custom packaging supported)

Form: Powder

Product Number: G06030011

Stock: In stock

Luminescence: Orange-red

Ru(bpy)2dppz(PF6)2 is a classic ruthenium(II) polypyridyl complex luminescent probe. Due to the dppz ligand forming hydrogen bonds with water molecules in aqueous solution, its luminescence is almost completely quenched. However, when it intercalates into the base stack of double-stranded DNA, the microenvironment around the ligand changes, inhibiting non-radiative quenching processes and resulting in a significantly enhanced orange-red luminescence signal.

Due to this property, this molecule serves as a classic molecular probe for DNA binding studies and nucleic acid detection, finding wide application in biochemical and molecular biology research.



2. Application Scenarios
  • Nucleic Acid Quantification and Structural Analysis
    As a classic DNA "light-switch" probe, used for DNA presence determination, quantitative detection, DNA structural changes, and DNA damage analysis.

  • Photophysical and Photochemical Studies
    As a typical Ru(II) polypyridyl complex, it serves as a textbook-level reference model for studying metal-to-ligand charge transfer (MLCT), excited state lifetimes, solvent effects, and hydrogen bonding quenching mechanisms.

  • Electrochemical Biosensor Development
    This complex exhibits excellent electrochemical activity, suitable for modifying electrodes. By detecting electrochemical signal changes upon DNA binding, it enables highly sensitive DNA mutation recognition and nucleic acid detection.

  • Biomolecular Interaction Studies
    Used to study the intercalation binding modes and conformational changes of small molecules/proteins with DNA.



3. Core Advantages

✅ Light-Switch Effect
Leveraging the unique mechanism of "quenching by hydrogen bonds in water, luminescence recovery in the hydrophobic DNA environment," the background luminescence is extremely low in the absence of nucleic acids. Upon intercalation into the DNA double helix, it rapidly releases orange-red fluorescence, enabling high signal-to-noise ratio detection.

✅ Multimodal Research Potential (Optical + Electrochemical)
In addition to its excellent fluorescence properties, this complex also possesses good electrochemical activity, allowing its use in constructing DNA electrochemical biosensing systems for synergistic studies using optical and electrochemical signals.

✅ Stable Performance
As a classic system for studying MLCT excited states, this molecule is highly representative in photophysical research. The product offers high purity and batch-to-batch stability, serving as a reliable reference molecule for fundamental research and method development.

✅ Stable Binding
The planar aromatic dppz ligand stably intercalates between DNA base pairs, exhibiting good binding affinity for double-stranded DNA. It is suitable for analyzing DNA changes, damage, and molecular interactions.




Extended Services

Change begins with choosing a stable and reliable probe. We sincerely invite you to experience the excellent performance of the new domestic force.

For more luminescent probe products or custom packaging services, please call +86-13302967066!

For related products such as blood cell dyes and buffer salts, you can view the complete product line and technical specifications on [MedSun Biotechnology Website].

GeneSeqTools Bioscience & Technology is dedicated to providing reliable domestic alternative solutions for gene sequencing, molecular diagnostics, and microbial detection.


In Vitro Molecular Diagnostics | Gene Sequencing | Microbial Detection
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Shenzhen GeneSeqTools Bioscience & Technology Co. Ltd.

Founded in 2015, it is a high-tech enterprise focusing on microbial testing gene sequencing and in vitro molecular diagnostics in the R&D, production, and sales of biochemical reagent raw materials. Committed to providing high-quality biochemical reagent raw materials and professional custom synthesis services, the product portfolio covers more than a dozen categories and nearly a thousand innovative products. Upholding the core philosophy of “customer first, integrity and professionalism”, we serve with dedication to meet customers’ diverse needs in research and testing.

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